Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015944350.1_cds_XP_016487207.1_77969
CDS Infomation

[gene=LOC107807362] [db_xref=GeneID:107807362] [protein=probable xyloglucan 6-xylosyltransferase 5] [protein_id=XP_016487207.1] [location=join(15835..16356,16900..17802)] [gbkey=CDS]
Sequence

ATGTATAATTCATTCTCATGTTTTCAACTTTGTATTATCTCTTTAATTCCAAAGATGGTC
CAATTCACGGCCTTAAAAAGGCTAACTTCGGCTGGCGTGGGCGCCACTCTCCCCACCTCC
ACAAAGAACGGTGGCGCCTCCGCCCGCTCAGCCTCCGCGGGCCTCCTTCGCCGGCGACGT
GTTGCCAATTCATTTGGCAACCTTAAGCTCACCATCCTATGTGGGATTGTAACAATTTTA
GTATTGCGTGGCACCATAGGACTCACCAACTTCTCCTCTAATAGTTCCTCTCTTGACCAA
ACCCAAGAACTTATTGAAGAAACTAATCGGGTCATTGCTGAGATCCGATCAGATAGCGAC
GACGACGACAACAACGACGAAGATGATCATTCTGAATTTTCTCATAATGCTAGCTATACT
CTAGGTCCAAAAATCACCAACTGGGATTTTACAAGAAAAGCTTGGCTCCATGAAAATCCA
AGATTTCCTAGTTATGTAAATGGCAAGCCTCGTGTTTTACTGGTAACAGGCTCACCTCCA
AGTCCATGTGACAATTCAATTGGTGATCATTATTTGTTAAAGTCAATAAAGAACAAGATT
GATTATTGCAGAATTCACAACATAGAAATTGTGTACAACATGGCTCATTTGGATAATCAG
CTATCAGGGTACTGGTCAAAATTACCATTAATTAGGAAACTAATGATTTCTCACCCAGAA
ATTGAGTGGATTTGGTGGATGGATAGTGATGCAATGTTTACAGATATGACATTTGAAATT
CCATTATCTAAATATGATGGCAAAAATTTAATTATTCATGGATATCCTGAATTATTAAAT
GAAAAATCTTGGGTTGCTTTAAACACTGGGAGTTTTCTACTAAGGAATTGTCAATGGTCT
TTAGATTTGCTTGATTCTTGGGCACCAATGGGACCAAAAGGTAAAATTCGCGACGATGCT
GGAGAAATTTTAACAGCAAATTTAAAGGGTAGGCCTAATTTTGAAGCAGATGATCAATCA
GCGCTGATATACCTGTTGATTTCGCAGAACAATAAGTGGATGGAGAAGGTGTTTATTGAG
AGTTCTTATTATTTACATGGATATTGGGCAGGTTTAGTTGATCGATACGAGGAAATGATC
GAGAAATACAAACCAGGTTTTGGTGATGAGAGATGGCCATTTGTGACACATTTTGTTGGT
TGTAAGTCTTGTGGAAGTTATGGGGATTATCCAGTTGAGAAATGTTTGAAGAGTATGGAG
AGAGCTTTTAATTTTGCAGATAATCAAGTGCTTAAATTGTATGGCTTTAGGCATAGAGGA
TTGTCAAGTCCTAATATTAAAAGGATTAGAAATGAAACCTTTAGGCCTTTGGAGTTTGTT
GGTCAGTTTGACATTAGACATTCTGCACTTATAGGCAGTCTATGA

Peptide Sequence

PEP ID

XP_016487207.1
PEP Infomation

PREDICTED: probable xyloglucan 6-xylosyltransferase 5 [Nicotiana tabacum]
Sequence

MYNSFSCFQLCIISLIPKMVQFTALKRLTSAGVGATLPTSTKNGGASARSASAGLLRRRR
VANSFGNLKLTILCGIVTILVLRGTIGLTNFSSNSSSLDQTQELIEETNRVIAEIRSDSD
DDDNNDEDDHSEFSHNASYTLGPKITNWDFTRKAWLHENPRFPSYVNGKPRVLLVTGSPP
SPCDNSIGDHYLLKSIKNKIDYCRIHNIEIVYNMAHLDNQLSGYWSKLPLIRKLMISHPE
IEWIWWMDSDAMFTDMTFEIPLSKYDGKNLIIHGYPELLNEKSWVALNTGSFLLRNCQWS
LDLLDSWAPMGPKGKIRDDAGEILTANLKGRPNFEADDQSALIYLLISQNNKWMEKVFIE
SSYYLHGYWAGLVDRYEEMIEKYKPGFGDERWPFVTHFVGCKSCGSYGDYPVEKCLKSME
RAFNFADNQVLKLYGFRHRGLSSPNIKRIRNETFRPLEFVGQFDIRHSALIGSL

Transcript Sequence

Gene sequence data has not been registered.